“A patient had just died from what looked like inhalation anthrax. What should she do?
“I said, ‘I know precisely what to do,’ ” Dr. Musser said. “ ‘We just spent three hours talking about it.’ ”
The questions were: Was it anthrax? If so, was it a genetically engineered bioterrorism strain, or a strain that normally lives in the soil? How dangerous was it?
And the answers, Dr. Musser realized, could come very quickly from newly available technology that would allow investigators to determine the entire genome sequence of the suspect micro-organism.”
But as the case report reveals, it should have been clear that this organism wasn’t B. anthracis pretty quickly, just by looking at the agar plate. B. anthracis is non-hemolytic, and non-motile. B. cereus is both beta-hemolytic and motile. In fact, the lab involved identified it presumptively as B. cereus long before the whole genome sequencing was done. Furthermore, the association between B. cereus and necrotizing pneumonia among welders is well described, as is the presence of B. anthracis toxin genes in pathogenic B. cereus isolates. I’m not discounting the importance of genomic pathology—I’m just sayin’, you can still get a long way with traditional microbiological techniques (like looking at an agar plate).