A few hours after I posted yesterday on the survey of Internal Medicine residents on why they won't pursue training in Infectious Diseases, a reader alerted me to another new paper on ID physician salaries in Open Forum Infectious Diseases (free full text here with additional data available on the IDSA website requiring a membership password). This study was also sponsored by IDSA. The title of the paper is ID Physician Compensation--An Improved Perspective.
From this survey of nearly 1,900 ID physicians, we learn that the median salary of a full-time physician that is focused on patient care is $210,000. The data are sliced and diced in many ways, and are interesting to review.
The spin in the discussion (alluded to in the title of the paper) is that things are really not as bad as we thought. The authors point out that the often quoted Medscape survey has a small sample size and underestimates the true salary of ID docs. And while that is true, we still need to maintain perspective.
We know that our biggest competitor is hospital medicine. So let's take a look at hospitalist salaries. In 2013 (2 years before the IDSA survey), the overall median compensation for hospitalists was $254,000. So for an additional 2 years of training, the Infectious Diseases doctor will earn $44,000 less than his/her hospitalist colleague. And don't forget, full time for a hospitalist is, on average, 40 hours per week. How many ID doctors work 40 hours weekly?
Unfortunately, for most internal medicine residents, this decision is a no-brainer and I doubt this new survey will have much impact. Spin on, IDSA, spin on.
Pondering vexing issues in infection prevention and control
Saturday, April 30, 2016
Friday, April 29, 2016
The delusion continues
There's a new paper in Clinical Infectious Diseases on the highly anticipated survey of Internal Medicine residents to solve the enigma of why no one is going into infectious diseases. It never seemed to be a mystery to me, but having data is always helpful, providing that you interpret it correctly. And here that caveat concerns me a great deal.
The survey results were divided into three groups: those applying or intending to apply to ID fellowship, those interested in ID but deciding not to apply, and those with no interest in ID. Of those who had an interest but didn't apply (the group that we should have some hopes of capturing), the number one reason for not going into ID was SALARY. Moreover, when asked what is the most important factor to increase interest in ID, all three groups said SALARY. For those going into ID and those who considered it, the percent responding salary was two-fold higher than the next most commonly cited factor (early exposure to the field of ID).
So no surprises here. But what was both surprising and alarming to me was that the discussion in the paper and the accompanying editorial both seemed to downplay salary as a factor in the current dearth of applicants to ID. The authors wax eloquently on career choice models, pedagogical techniques, the importance of mentors, etc. Salary is buried in half a paragraph of the eight paragraph discussion. The authors of the editorial even seem somewhat astonished that the top career choice of those who considered ID but didn't apply was general internal medicine, a specialty that they note "is not typically considered a high remuneration specialty." I think there's no surprise here either for two reasons: (1) hospitalists make significantly more money on a per hour basis than most infectious diseases doctors, particularly in the academic setting, and (2) whatever that difference in salaries is, it's magnified by the fact that two more years of training (at least) results in a lower salary. That is, you are punished economically for additional training, which many folks find too unpalatable to move beyond.
My bet is that the paper and editorial are nicely in line with IDSA's thinking since IDSA sponsored the study. And I suspect that IDSA will continue to pretend that all is well while the dumpster fire burns away. Once we get the microbiology courses in medical schools to stop making the students memorize so much, the students will come racing to ID!
Carry on then.
The survey results were divided into three groups: those applying or intending to apply to ID fellowship, those interested in ID but deciding not to apply, and those with no interest in ID. Of those who had an interest but didn't apply (the group that we should have some hopes of capturing), the number one reason for not going into ID was SALARY. Moreover, when asked what is the most important factor to increase interest in ID, all three groups said SALARY. For those going into ID and those who considered it, the percent responding salary was two-fold higher than the next most commonly cited factor (early exposure to the field of ID).
So no surprises here. But what was both surprising and alarming to me was that the discussion in the paper and the accompanying editorial both seemed to downplay salary as a factor in the current dearth of applicants to ID. The authors wax eloquently on career choice models, pedagogical techniques, the importance of mentors, etc. Salary is buried in half a paragraph of the eight paragraph discussion. The authors of the editorial even seem somewhat astonished that the top career choice of those who considered ID but didn't apply was general internal medicine, a specialty that they note "is not typically considered a high remuneration specialty." I think there's no surprise here either for two reasons: (1) hospitalists make significantly more money on a per hour basis than most infectious diseases doctors, particularly in the academic setting, and (2) whatever that difference in salaries is, it's magnified by the fact that two more years of training (at least) results in a lower salary. That is, you are punished economically for additional training, which many folks find too unpalatable to move beyond.
My bet is that the paper and editorial are nicely in line with IDSA's thinking since IDSA sponsored the study. And I suspect that IDSA will continue to pretend that all is well while the dumpster fire burns away. Once we get the microbiology courses in medical schools to stop making the students memorize so much, the students will come racing to ID!
Carry on then.
Thursday, April 28, 2016
More data support a common source for the M. chimaera outbreak
As we’ve suggested here and here, the information to this point strongly suggests that the M. chimaera outbreak linked to heater-cooler units (HCUs) is a “common source” outbreak, which has major implications for outbreak response.
Another piece of the puzzle was published today by Haller and colleagues in Eurosurveillance. Read the whole thing for details of the German outbreak investigation, but the key additional findings are in the table above—brand new HCUs, and the water source at the manufacturing facility, grew M. chimaera. The genome-sequencing results are not included in this report, but read this key paragraph from the discussion below:
"Preliminary typing results indicate that the M. chimaera isolates detected by the authorities and the isolates from the manufacturer appear to be almost identical (unpublished data). The M. chimaera-positive environmental samples at the manufacturing site prompted the manufacturer to modify the manufacturing process, which now includes ethanol disinfection and an active drying of the HCU water circuit before shipment. ……According to the information provided by the manufacturer, HCUs manufactured before mid-August 2014 may have had environmental mycobacteria presence in the unit at the time of delivery [emphasis mine]. Our investigations could not elucidate if and until when contaminated HCUs may have been delivered to customers from this manufacturer."
It is, of course, impossible to know for how long units were shipped “pre-contaminated” from this manufacturing site to users, but this now-published information only increases the rationale for removal of these HCUs from the operating room. Both Dutch and German authorities took this step, as the authors note. The US should as well—it shouldn’t take long to determine the impact on HCU function of extending the tubing sufficiently to allow this.
Wednesday, April 27, 2016
Here we go again: Active detection and isolation, C. difficile edition
An interesting study in JAMA Internal Medicine, likely to generate a lot of discussion, addresses the use of “active detection and isolation” (ADI) for control of C. difficile disease. This quasi-experimental, single-center study employed PCR screening (tcdB detection) of all patients admitted through the emergency department (patients admitted from other locations were excluded, as were “short stay” patients), and those that were found to carry toxigenic C. difficile were admitted into a kind of “quasi-isolation”—gloves were used, but not gowns or private rooms. So all-in-all, a very pragmatic (and somewhat idiosyncratic) intervention. Healthcare-associated C. difficile disease rates declined after the intervention, which students of prior quasi-experimental studies of ADI for MRSA and VRE will find unsurprising.
At this point, I will outsource my blog post to Jon Otter and Martin Kiernan at the Reflections IPC blog. Go on, head over there for an excellent pro-con post about this study, and vote on the question posed at the end of the post. Then come back here to read my only additional observation…..I can wait (spoiler alert: I agreed with Jon).
OK, you’re back: the only thing I have to add to Jon and Martin’s excellent post is this: we’ve been here before. Recall the persuasive quasi-experimental studies (many single-center, some multicenter) of MRSA and/or VRE ADI published over the course of a couple decades. When better designed studies were eventually performed and published (e.g. STAR*ICU, REDUCE-MRSA, MOSAR, this one by Harbarth and colleagues that doesn't have a catchy acronym)—you know, studies that included concurrent control groups (control groups are for losers!), it became evident that ADI wasn’t the key to MRSA or VRE control. I think we’re headed down that road again, this time with C. difficile. Who’s going to step up and organize the multicenter, cluster-randomized trial we need to do now? Or perhaps better to ask: who is going to pay for it?
Tuesday, April 26, 2016
Peace, Love and Hand Hygiene
Sanjay Saint, Professor of Medicine at the University of Michigan and Chief of Medicine at the Ann Arbor VA Medical Center, discusses changing healthcare's culture through conformity, social learning (monkey see, monkey do) and mindfulness in a new TEDx talk. Worth a listen.
Wednesday, April 20, 2016
Efficacy versus effectiveness
Take a moment to check out this video from today's NY Times.
If a hand hygiene method demonstrates marginally better reduction in bacterial counts on hands, but is also more complicated and takes longer to complete, should it become the standard?
Related question: does the difference in log10 bacterial counts between 2.58 CFU/ml and 2.88 CFU/ml translate into a greater risk for pathogen transmission in healthcare settings?
I’ll let you ponder the above questions, as I don’t have the answers. One thing I do know: when a hand hygiene paper in Infection Control and Hospital Epidemiology is being covered by the NY Times, we’re winning!
I’ll let Eli and Mike comment on how many of the people depicted in the video are bare below the elbows!
Tuesday, April 19, 2016
Public Reporting - Do we need big brother?
I was fortunate to be an invited speaker at the 2016 ECCMID meeting in Amsterdam last week. My topic was "Monitoring Process of Care: Do We Need Big Brother?" I used the opportunity to take a big picture view of public reporting of HAI and MDRO data in the US and Europe and a closer look at the selection of process versus outcomes measures for reporting. I've posted my slides below and you can also listen to my talk on ECCMID's website. As I believe Dan stated earlier, I hope that all meetings evolve to allow free/open access to presentations like ECCMID has.
Sunday, April 17, 2016
Not just another guideline
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| Why is this man laughing? Because he co-authored an awesome antibiotic stewardship guideline! |
Instead, treatment guidelines for specific clinical syndromes are more likely to guide prescribing decisions, either by direct application or via their incorporation into facility specific practice guidelines or CMS measures. Thus the impact of the stewardship guideline will be limited unless stewardship principles are also incorporated into treatment guidelines, pathways, and quality measures. This point was made in a recent editorial by Brad Spellberg, Arjun Srinivasan and Chip Chambers, and I know that HICPAC plans to summarize the stewardship principles that should be incorporated into all ID-related treatment guidelines.
Ensuring that antibiotic stewardship principles are considered carefully when infection-related quality measures are established is a continuing challenge—once a measure is tied to payment and/or public reporting, the law of unintended consequences takes over, including consequences for antibiotic use. We learned this with the ill-fated “4-hour rule” for treatment of community acquired pneumonia, which likely led to an untold number of inappropriate antibiotic doses and C. difficile cases, and we’re struggling with it again around the new sepsis measure.
Finally, truly informed stewardship awaits a lot of research and development progress: to better establish dose and duration of therapy for common conditions, to improve diagnostics to allow more rapid directed therapy, as well as improved capacity to distinguish bacterial, fungal and viral etiologies, to more precisely determine the relative impact of different antibiotics on host microbiota (and the implications thereof), etc., etc., etc. Someday, I hope, we’ll be able to look back at the 2016 guideline and marvel at how rudimentary it is—for now, though, it’s excellent, so go read it!
Thursday, April 14, 2016
Mycobacterium chimaera update: A “must listen” from ECCMID

Fortunately, Dr. Jakko van Ingen gave an excellent talk at ECCMID that answers several important questions we’ve had about this outbreak, confirming some of the things we’ve heard (“in confidence”, I assume for political or legal reasons) on various conference calls and email strings. I urge you to take 30 minutes of your time to listen to his talk, all the way to the end of the Q&A period.
Aside from being an extremely entertaining speaker, Jakko addresses several key questions, including:
- Is this a clonal outbreak? YES. Slide 29 reports whole genome sequencing data that clusters the isolates from Sorin 3T units and infected patients (within just 2-3 SNPs), and further discussion (during Q&A session) confirms that isolates from other European countries are also in this cluster.
- Were the HCUs already contaminated prior to being shipped to end users? YES. Listen carefully to the last question and answer.
- Does this particular outbreak primarily involve one make/model of HCU? YES. While nontuberculous mycobacteria have been isolated from other types of HCUs, the specific M. chimaera cluster in this case involves Sorin 3T units.
- Is the invasive, disseminated, high crude mortality form of the illness restricted to those patients with implants (e.g. valves, grafts)? YES. The life-threatening disseminated infection appears to require some prosthetic material to which the organism can adhere, protecting itself (via biofilm formation) from host defense. According to Dr. van Ingen, case finding in the Netherlands is now limited to those with implants, and does not include standard non-valve, non-implant CABG patients.
- Is it possible to mount an effective, rapid national response to this urgent problem? YES. Slide 18 details the Dutch response, which involved discontinuing all non-urgent cardiac surgery until HCUs were placed outside of ORs (which was done within 48 hours). As we learned here when we did the same thing, it is amazing what you can accomplish when you are left with no other option.
- Is opening up a Sorin 3T HCU a frightening experience? YES. I’m sure I’ll have nightmares about these water-stained, biofilm-befouled devices for a long time (see below for one image from Garvey, et al).
What are the implications?
- HCUs are not safe to operate in an OR. The air exhausting from the HCU ventilation fan must be physically separated from the air in the OR, and the easiest way to do that is to remove them from the OR (and maintain the OR at positive pressure, of course).
- Everyone using Sorin 3T HCUs should assume that they may have exposed patients to M. chimaera, until more is known about the details of the point-source. Contaminated units cannot be disinfected even with the more intensive protocols currently recommended. In addition, only a few labs are capable of properly performing NTM cultures of water samples, so negative water cultures are of limited value and could be falsely reassuring.
- A much more active national patient and provider notification is needed. Our experience is similar to that of others: identified cases would never have been found had it not been for aggressive and active case-finding. There are undoubtedly others currently being treated with immunosuppression for sarcoidosis or some other “granulomatous process of uncertain etiology” who actually have undiagnosed disseminated M. chimaera disease.
Below I've pasted an epidemic curve of non-tuberculous mycobacteria (NTM) cases linked to HCUs (inclusive of M. chimaera, but also isolates not identified to species level and other NTM such as rapid-growers), including cases reported to FDA from US (blue bars) and abroad (red). This outbreak isn't over, and the fact that there are still hospitals performing cardiac surgery with their Sorin 3T HCUs inside of the OR is extremely distressing.
Sunday, April 10, 2016
ECCMID: Year in Infection Control
First, a hearty THANKS to ECCMID organizers for setting up a truly excellent website that allows for almost real-time access to presentations (at least those for which the presenter gave permission). Head to this link to hear two of the "Year in Infection Control" talks from this morning, by Drs. Anucha Apisarnthanarak and Sebastian Lemmen. Just click on the screen icon to the left of the speaker's name and you're off to the races.
Regarding the talks in the sepsis session I blogged about yesterday, unfortunately only one of the four speakers appears to have agreed to have the talk accessible on the web--Dr. Tom van der Poll's talk is available here.
I consider any talk I give to be in the public domain immediately afterwards, so I don't understand why presenters would decline to have their talks posted to a conference website. Maybe it's just a paperwork snafu.
Saturday, April 9, 2016
My week with SIRS
I’ve been down for several days this week with influenza A, which is not shocking since this year’s vaccine (yes, I did receive it) has a whopping 51% effectiveness against the predominant circulating strain. You’ll have to find our prior posts on the horrible influenza vaccine on your own, myalgias prevent me from adding more links.
Early into illness, I had a vivid dream in which I was being admitted to a hospital. A doctor who looked exactly like the Phillie Phanatic told me I met criteria for SIRS/sepsis, and started administering vancomycin and piperacillin-tazobactam by direct injection into my kidneys.
But the only thing more boring than stories about people's self-limited viral infections are stories about their dreams, so I’ll stop now and retire quickly to my sofa (this, of course, is a really bad sepsis pun about the new qSOFA score). For while I did meet SIRS criteria, I never met qSOFA criteria (RR >= 22/min, altered mentation, or SBP <= 100 mm Hg), demonstrating with an N of 1 that qSOFA is more specific for identifying those likely to suffer "poor outcomes typical of sepsis".
Eli already linked to the Third International Consensus Definitions for sepsis, which are well worth a read. There is also an excellent piece in Slate about sepsis, by Dr. Jeremy Faust (an Emergency Medicine resident at Mt. Sinai in NYC), that accessibly covers the new definitions and the unintended adverse consequences of the CMS sepsis measure, including those that impact antibiotic stewardship. Finally, ECCMID is underway and I’ve already read tweets about a terrific session on sepsis there today—I’m assuming the content will be available at this link once the session is uploaded.
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