Showing posts sorted by relevance for query chimaera. Sort by date Show all posts
Showing posts sorted by relevance for query chimaera. Sort by date Show all posts

Monday, June 20, 2016

The unfolding M. chimaera debacle: June 2016 update

It’s time for some updates about the evolving global outbreak of invasive M. chimaera infections linked to heater-cooler units (HCUs—see prior posts here). Notable developments in June include:

Release of an FDA Safety Alert regarding the Sorin 3T HCU: In this alert, the FDA references the Eurosurveillance study we recently discussed, recognizing the evidence for factory-source contamination of 3T units, stating that “if your facility purchased and used a 3T prior to September 2014, be aware that the units may have been shipped from the factory contaminated with M. chimaera”. FDA now recommends all such facilities (1) inform surgeons about their patients’ infection risk, and (2) “determine a method for patient follow-up and establish patient surveillance” (per CDC recommendations). 

Do you know if your hospital uses the 3T units? If so, are you alerting clinicians and working on a surveillance approach?

Meeting of the FDA Circulatory System Devices panel (June 2-3, 2016): During this meeting, the risks of bio-aerosol generation by HCUs were discussed at length. Slides and other materials from this meeting are here. Although all slide sets are available at this site, a quick 24-hour summary is here. Here are a few of my own random observations from this meeting:
  • Awareness of this issue is still very limited, a point made by several panel members who should have already heard about fatal infections linked to HCU bio-aerosol generation. Broader notification is needed.
  • HCU models differ dramatically in their design, and in their risk for production of aerosols (for example, the range of air movement by the HCU fans is an astonishing 20->700 cubic feet of air per minute, and the location and containment of the water source also varies). 
  • Routine culturing of HCU water for mycobacterial contamination isn't particularly useful and will likely not be recommended outside of outbreaks or clusters of infection. Only a small number of labs can do the cultures properly, negative results can be falsely reassuring, and the cultures take 8 weeks to return. Our own experience confirms this--we've had consecutive samples from the same unit yield different results, as have others. However, routine bacterial cultures ("heterotrophic counts") will continue to be recommended as a monitor for effectiveness of disinfection.
  • No obvious near-term solution is evident. Replacement or recall of all 3T units is not possible given that it has 60% market share, and the panel felt that removal of the HCUs from the OR is not practical (despite the fact that some EU countries have done so). A rapidly-implementable engineering solution is desperately needed.
Thus there are undoubtedly many M. chimaera-contaminated 3T units being operated inside ORs, which really is an untenable situation. If your hospital can’t engineer a solution to remove this device from the OR (or otherwise separate the 3T HCU exhaust air from OR air), then you should seek to replace them with other makes/models not linked to this global outbreak. 

Publication of the first US case series of invasive M. chimaera infections. Three cases have been reported from Mayo Clinic, preprint available from OFID here. The cases have similar clinical presentations to those reported already from Europe, and larger case series are undoubtedly to follow. Notably, two of the three patients in the Mayo series died, and the third (a 66 year old with aortic graft infection) is being treated medically due to the risk of graft replacement.

Based upon what I’ve heard from other clinicians caring for these patients, I propose this as an open question: once a patient has a device-associated invasive/systemic infection due to M. chimaera, is cure possible? Given the very long incubation period for this syndrome, this question is not currently answerable. The criteria for cure would require 24+ months without symptoms (and with negative cultures), after device replacement and 18 months of therapy. Stay tuned.

Saturday, February 6, 2016

Insidious

This term, defined by Merriam-Webster as “causing harm in a way that is gradual or not easily noticed”, keeps occurring to me as we continue our investigation and response to a case of M. chimaera infection. Our early efforts to address the “not easily noticed” part of this problem is starting to bear fruit, with some increased media attention and an excellent piece by Maryn McKenna.

In this post I want to raise three questions about this situation (note that I say “raise”, not answer):

1. Why M. chimaera?

Why is this particular, uncommon species from within Mycobacterium avium complex (MAC) causing infections in multiple countries in Europe and multiple states in the U.S.? If the cause of this outbreak were simply a faulty heater-cooler unit (HCU) design that allows whatever water is placed in the device to be aerosolized, one would expect a greater variety of environmental flora to be implicated (other MAC species, environmental Gram negatives, etc.). And indeed, there has been concern regarding a link with some of the rapidly-growing mycobacteria (e.g. M. abscessus), that are often found in the hospital tap water used to fill the HCUs (until more recent guidance to use sterile or filtered water). However, the consistent finding of M. chimaera from patients exposed to HCUs suggests a “point-source”. Molecular typing or genome sequencing will be needed to confirm this, and I know some of this work has been done—I hope the results are published soon. It is extremely important to understand this, because a point source implies that the HCUs may already be contaminated when shipped to hospitals. The units are tested prior to shipping, so they do get filled with water at the factory, and the recent FDA warning letter suggests that the tests used by the company to monitor their disinfection and drying process at the factory are “inadequate”. If an organism like M. chimaera has already colonized the HCU (and formed a biofilm), good luck disinfecting it.

2. When should patients be notified as part of a look-back or case-finding investigation?

There are several hospitals across the U.S. that are working with public health officials (state or CDC) to respond to the identification of one or more M. chimaera infections. Obviously, notifying every patient who has undergone bypass for the past four years is a huge endeavor: resource intensive, generating bad press and patient anxiety. Undoubtedly there are hospitals that have decided not to do patient notification (which is why you’ve not heard about them).

So let me review our thinking on this. One of the first steps of any outbreak or exposure investigation is to do additional case-finding, without which it is impossible to understand the extent of the problem, and impossible to provide either preventive or therapeutic care to the exposed or infected. In some outbreaks, case-finding can be limited to record reviews because the infection essentially always comes to medical attention (e.g. MRSA bacteremia), or because it resolves without treatment if it doesn’t come to medical attention. For the reasons outlined by Mike, there is no way to know how many M. chimaera infections have occurred without doing notification—of both patients and providers. Thus once we learned about a case, we felt the only ethical option was to proceed with an extensive patient notification (in addition to the other case-finding using lab and patient records). If even a single exposed patient is being bounced from one specialist to another with prolonged FUO because nobody has reason to do mycobacterial blood cultures in someone with an intact immune system, we need to identify that person in order to provide therapy.

A counterargument would be that a nationwide notification should be performed, rather than these piecemeal notifications from individual centers that happen to find a case—however, it is not clear to me how that could be done, logistically, and we’ve learned in the past few days that the notifications from CDC and FDA in October of last year were insufficient at increasing awareness of the problem.

3. What should FDA be doing?

Note that I say FDA, not CDC—because CDC has no enforcement function. The agency that needs to step up aggressively to address this problem is FDA. As outlined here, they’ve already informed the manufacturer that they will block the shipment of new units to the U.S. until this problem is addressed. However, depending upon the answer to question 1 above, we are still left with 60-80% of all HCUs in US hospitals at risk for aerosolizing M. chimaera, with no way to know whether current cleaning and disinfection protocols are effective. The approach we’ve taken (to move the units outside the OR) is not feasible for many hospitals due to the requirement that the unit be within 5 meters of the patient. Likewise, it isn’t feasible to ban the existing units, as the supply of other HCUs is not sufficient and you can’t just stop doing heart surgery. The Sax group referenced construction of a containment unit for the HCUs that exhausted through a HEPA filter, but it isn’t known how that might impact the performance of the HCU. Other engineering solutions must be available, something that can be mass-produced and used to modify the existing units so that the exhaust is safe. In the era of 3-D printers and such, someone must be able to figure this out quickly!

Sunday, October 2, 2016

The ineradicable Mycobacterium chimaera

I’ve been on service for three weeks, limiting my blogging time—so this short update on the M. chimaera debacle is long overdue. Sorry! Two important recent “must-reads” about this global outbreak with a crude mortality rate of ~50%:

Peter Schreiber and colleagues from Switzerland report their experience trying to eradicate M. chimaera from their heater cooler units (HCUs) using an intensified cleaning and disinfection protocol (daily water changes using Pall-filtered tap water and 3% hydrogen peroxide, with biweekly 3% sodium hypochlorite (aka bleach) or paracetic acid disinfection). I’ve included part of their Figure 2 above: “No” means negative culture, “Yes” with a solid circle indicates M. chimaera growth, empty circles are other non-tuberculous mycobacteria. As you can see, M. chimaera persisted despite this intensified regimen, and cultures frequently skipped between positive and negative (and back again). This study nicely demonstrates the ineradicable nature of M. chimaera colonization in these Sorin 3T units, as well as the poor negative predictive value of a single set of HCU water cultures. Not only does a negative culture not reassure, but it takes 6-8 weeks to return—so cultures are not actionable for management of individual HCUs.

Another interesting tidbit from this article: a photo of the “housing unit” that they built to separate the HCU exhaust air from OR air and funnel it directly to the OR exhaust system (see Figure below from their article).
Finally, take a minute to read the best recent news article about this outbreak, from David Weissman at the York Dispatch. I continue to be astonished at the relative lack of media interest in this slow-motion train wreck, but in this piece the reporter clearly understands the potential ramifications of this problem, and touches on a key point: why hasn’t there been more attention to patient notification for those who were exposed to HCUs that we now know were contaminated when they left the factory?

More updates soon, as some interesting sequencing data will likely be published later this week…

Thursday, April 14, 2016

Mycobacterium chimaera update: A “must listen” from ECCMID


We’ve posted several times about the horrible M. chimaera outbreak linked to heater-cooler units (HCUs) used during cardiac bypass surgery. As we’ve addressed the problem here at Iowa, we’ve become increasingly frustrated (and dumbfounded) at the lack of available information about the clinical and epidemiological features of the outbreak itself, and at the general lack of urgency about this ongoing and grave risk to patients. 

Fortunately, Dr. Jakko van Ingen gave an excellent talk at ECCMID that answers several important questions we’ve had about this outbreak, confirming some of the things we’ve heard (“in confidence”, I assume for political or legal reasons) on various conference calls and email strings. I urge you to take 30 minutes of your time to listen to his talk, all the way to the end of the Q&A period. 

Aside from being an extremely entertaining speaker, Jakko addresses several key questions, including: 
  • Is this a clonal outbreak? YES. Slide 29 reports whole genome sequencing data that clusters the isolates from Sorin 3T units and infected patients (within just 2-3 SNPs), and further discussion (during Q&A session) confirms that isolates from other European countries are also in this cluster.
  • Were the HCUs already contaminated prior to being shipped to end users? YES. Listen carefully to the last question and answer.
  • Does this particular outbreak primarily involve one make/model of HCU? YES. While nontuberculous mycobacteria have been isolated from other types of HCUs, the specific M. chimaera cluster in this case involves Sorin 3T units. 
  • Is the invasive, disseminated, high crude mortality form of the illness restricted to those patients with implants (e.g. valves, grafts)? YES. The life-threatening disseminated infection appears to require some prosthetic material to which the organism can adhere, protecting itself (via biofilm formation) from host defense. According to Dr. van Ingen, case finding in the Netherlands is now limited to those with implants, and does not include standard non-valve, non-implant CABG patients.
  • Is it possible to mount an effective, rapid national response to this urgent problem? YES. Slide 18 details the Dutch response, which involved discontinuing all non-urgent cardiac surgery until HCUs were placed outside of ORs (which was done within 48 hours). As we learned here when we did the same thing, it is amazing what you can accomplish when you are left with no other option. 
  • Is opening up a Sorin 3T HCU a frightening experience? YES. I’m sure I’ll have nightmares about these water-stained, biofilm-befouled devices for a long time (see below for one image from Garvey, et al). 

What are the implications? 
  • HCUs are not safe to operate in an OR. The air exhausting from the HCU ventilation fan must be physically separated from the air in the OR, and the easiest way to do that is to remove them from the OR (and maintain the OR at positive pressure, of course). 
  • Everyone using Sorin 3T HCUs should assume that they may have exposed patients to M. chimaera, until more is known about the details of the point-source. Contaminated units cannot be disinfected even with the more intensive protocols currently recommended. In addition, only a few labs are capable of properly performing NTM cultures of water samples, so negative water cultures are of limited value and could be falsely reassuring.
  • A much more active national patient and provider notification is needed. Our experience is similar to that of others: identified cases would never have been found had it not been for aggressive and active case-finding. There are undoubtedly others currently being treated with immunosuppression for sarcoidosis or some other “granulomatous process of uncertain etiology” who actually have undiagnosed disseminated M. chimaera disease.
Below I've pasted an epidemic curve of non-tuberculous mycobacteria (NTM) cases linked to HCUs (inclusive of M. chimaera, but also isolates not identified to species level and other NTM such as rapid-growers), including cases reported to FDA from US (blue bars) and abroad (red). This outbreak isn't over, and the fact that there are still hospitals performing cardiac surgery with their Sorin 3T HCUs inside of the OR is extremely distressing.


Thursday, April 28, 2016

More data support a common source for the M. chimaera outbreak

As we’ve suggested here and here, the information to this point strongly suggests that the M. chimaera outbreak linked to heater-cooler units (HCUs) is a “common source” outbreak, which has major implications for outbreak response. 

Another piece of the puzzle was published today by Haller and colleagues in Eurosurveillance. Read the whole thing for details of the German outbreak investigation, but the key additional findings are in the table above—brand new HCUs, and the water source at the manufacturing facility, grew M. chimaera. The genome-sequencing results are not included in this report, but read this key paragraph from the discussion below:
"Preliminary typing results indicate that the M. chimaera isolates detected by the authorities and the isolates from the manufacturer appear to be almost identical (unpublished data). The M. chimaera-positive environmental samples at the manufacturing site prompted the manufacturer to modify the manufacturing process, which now includes ethanol disinfection and an active drying of the HCU water circuit before shipment. ……According to the information provided by the manufacturer, HCUs manufactured before mid-August 2014 may have had environmental mycobacteria presence in the unit at the time of delivery [emphasis mine]. Our investigations could not elucidate if and until when contaminated HCUs may have been delivered to customers from this manufacturer." 
It is, of course, impossible to know for how long units were shipped “pre-contaminated” from this manufacturing site to users, but this now-published information only increases the rationale for removal of these HCUs from the operating room. Both Dutch and German authorities took this step, as the authors note. The US should as well—it shouldn’t take long to determine the impact on HCU function of extending the tubing sufficiently to allow this.

Sunday, February 28, 2016

The link between M. chimaera and heater cooler units grows stronger

A new paper in the Journal of Hospital Infection from Germany confirms the work of Hugo Sax and colleagues in Switzerland on the aerosolization of M. chimaera by heater cooler units. These investigators cultured M. chimaera from the water tanks of 4 Sorin heater cooler units, and were able to culture the organism from the air in the operating room only when the units were turned on. They were also able to culture non-fermenters from the air up to 10 feet from the heater cooler units when the units were turned on, but not when they were turned off. Importantly, the investigators were not able to culture M. chimaera from the hospital's water supply. And the authors note that whole genome sequencing of clinical and environmental isolates from the Netherlands and Germany suggests the possibility that the heater cooler units are intrinsically contaminated (i.e., this is a point source outbreak).

Lastly, the authors state that "only strict separation of the heater cooler unit from the operating room appears to enhance patient safety." We agree and that is the mitigation strategy that we have used at the University of Iowa. Below are photographs of our engineers' solution, a 6 x 6 inch Corian portal through the wall of the operating room, so that the heater cooler units are housed outside of the OR. The door is light weight and closes fully when the heater cooler device is not needed, and partially when the heater cooler hoses are extending through the wall. Positive pressure in the OR is maintained when the portal is in use.

Dan and I have spoken with a number of physicians from across the country, and we are now aware of 18 M. chimaera infections in patients who have undergone cardiopulmonary bypass. All of these patients, with the possible exception of 1 patient, had a prosthetic valve or vascular implant placed. So patients with implants are most important if a look back needs to be performed for case finding.

Tuesday, February 2, 2016

M. chimaera infections associated with cardiopulmonary bypass

Dan and I have spent numerous hours recently on a particularly difficult infection prevention issue. We recently learned that a patient who underwent cardiothoracic surgery at our hospital developed an infection due to Mycobacterium chimaera. Last year, it was recognized that this organism is associated with heater-cooler devices used in cardiac surgery, and CDC and FDA put out alerts to hospitals in October 2015 regarding appropriate disinfection of these devices.

A paper in Clinical Infectious Diseases last year described an outbreak of these infections in Switzerland. The outbreak investigators determined that the water used in the heater-coolers became contaminated by M. chimaera. This water never comes into physical contact with the patient, but the investigators found that a fan on the heater-cooler unit aerosolized the organism into the air leading to direct contamination of the surgical wound. When the heater-cooler devices were present in the operating room but not turned on, the organism was not aerosolized.

Most of the reported cases have manifested as prosthetic valve endocarditis or vascular graft infections, and there may be involvement of the bone marrow causing cytopenias, as well as splenomegaly. The patients were not immunosuppressed. Often these patients presented with nonlocalizing symptoms, such as fever, mylagias, arthralgias, fatigue and weight loss. The mortality rate is approximately 50%.

Several issues make case finding problematic:
  • The time to diagnosis can be up to four years, as the incubation period for the infection due to this slow-growing mycobacterium is long, and diagnosis is often delayed since the organism isn’t detected in routine cultures.
  • Symptoms of the infection are often nonlocalizing.
  • We rarely order mycobacterial blood cultures in nonimmunosuppressed patients, and these cultures are key to making the diagnosis since most of the patients have infections of endovascular grafts or prosthetic cardiac valves.
  • Given that Iowa is primarily rural, many patients receive their post-operative care by local providers, making it more difficult to identify cases. 
For the reasons above, on the basis of a single case, we have embarked on a four-year look-back of 1,500 patients who underwent procedures utilizing cardiopulmonary bypass at our hospital. These patients are being instructed to call a toll-free number to be screened for symptoms that may be related, and then to undergo further evaluation if needed.

If your hospital performs procedures requiring cardiopulmonary bypass, the most important control measure to prevent infection is to move the heater-cooler devices out of the operating room. Our engineers were able to develop a solution and accomplish this within 24 hours. In addition, ensure that the devices are being disinfected according to manufacturers’ guidelines.

M. chimaera is one of 8 species in the M. avium complex, and was recognized as a a distinct species in 2004. Given the ubiquitous nature of nontuberculous mycobacteria, we suspect that the cases linked to heater-cooler devices reported to date represent only the tip of the iceberg, and it is likely that more hospitals will be facing extensive look-back investigations.

Saturday, February 20, 2016

M. chimaera transmission in the OR: Progress from Switzerland

Hugo Sax and his colleagues first reported the link between heater-cooler units (HCUs) and an outbreak of invasive Mycobacterium chimaera infections, and today they published a follow up investigation that strongly supports their hypothesis regarding mode of transmission.

I encourage you to read the article for yourself, but it describes a set of experiments using smoke dispersal and particle counts to demonstrate that the HCU tested (Sorin Model 3T) both dispersed smoke and increased particle counts over the surgical field in a OR with ultraclean airflow ventilation (also known as laminar flow). As would be expected, the dispersal of smoke and particles was greatest when the unit exhaust was oriented toward the surgical field, but higher particle counts were noted even when the exhaust was oriented away. Finally, settle plates were used to show that M. chimaera could be isolated up to 5 meters away from a contaminated HCU while it was in operation (this experiment was performed in a non-ventilated test room, so in essence determined how far the aerosols carried when no air currents were being generated (other than by the HCU itself). 

The video below shows how smoke dispersal through the HCU was carried by the OR ventilation system to directly over the surgical field (scary!). 
The authors point out that airflow systems designed to keep OR air clean may fail to protect against, or paradoxically contribute to, the dispersal of HCU exhaust over the surgical field. While I find this an interesting explanation for why some patients may be at higher risk for exposure and infection than others, the main story here is still that there is a device in the OR that produces a microbial aerosol:
“Heater–cooler units are stand-alone devices that contain a tank that holds filtered tap water, which serves as transfer fluid to control the temperature of patient blood and cardioplegia solution……The tank features filling and overflow tubes, heating and cooling coils, probes, and stirring devices. It is not airtight [emphasis mine]. The space beneath the tank holds a radiator to dissipate superfluous heat produced through water cooling. The efficacy of this radiator is increased by a fan that ensures a constant airflow through ventilation grid openings on either side of the heater–cooler unit housing.”
In short, this HCU seems designed to produce contaminated aerosols once it becomes colonized. Thus the only two options are to get the units out of the OR, or find a way to keep them clean. On this point, there is another key tidbit from this article: 
“…M. chimaera has regrown in some of the monthly water cultures from most factory-new heater–cooler units delivered in January 2014 after 1 year of operation on a daily water-change with filtered tap water scheme…”
This is consistent with what we’ve learned from others dealing with this issue: there seems to be no reliable way to keep these units free of contamination, or to decontaminate them once they are contaminated. 

Thus the most important sentence in this article is the last one: 
“…all heater–cooler units should be reliably separated from air that can gain access to sterile areas and instruments...”
How to accomplish this is the current challenge: we took the approach of removing the units entirely from the OR, while the authors report that “their exhaust air is now captured by a secondary housing and reliably channeled to the operating room exhaust.” 

Until a better-designed (i.e. safe) HCU is widely available, hospitals are in dire need of guidance about how to eliminate this insidious risk to their patients.

Wednesday, November 2, 2016

The M. chimaera How-to Guide

A few cases at a time, the M. chimaera outbreak associated with heater cooler units continues to grow. For reasons unclear to me, the response from CDC and FDA to this train wreck in slow motion has been underwhelming. We continue to field calls from hospitals struggling to deal with an approach to the outbreak. On today’s IDSA list-serv (IDea Exchange) Dr. Luther Rhodes wrote: “The silence is deafening. I call on those physicians with hands on experience in evaluating post open heart patients referred to ID for evaluation of concerns, signs or symptoms of possible NTM infection to speak up loudly and clearly. Lessons learned, protocols developed, evaluation and testing tools learned dealing with large scale regional patient notification should in my opinion be shared…”

We have posted several times on this topic, but I thought it might be useful to summarize how a hospital could approach this problem in a single post. To view older posts, type chimaera in the search box in the top right hand corner of your display.

Step 1: Determination of risk
Whether you have seen a case or not, the first question is whether your hospital has used the LivaNova Sorin T3 heater cooler unit (HCU) in the last six years. If the answer is no, there is no immediate action you need to take. If yes, then the investigation begins, as you must assume the units are contaminated, regardless of the manufacturing date.

Step 2: Risk mitigation
If you are currently using the LivaNova (Sorin) T3 unit, the most important risk mitigation strategy is to get the units out of the operating room. The molecular epidemiology clearly points to contamination of the HCUs at the manufacturing facility, which allows the units to produce an infectious bioaerosol that contaminates the operative field. Separation of this bioaerosol from the operative field is the key to eliminating the risk. Why the FDA won’t clearly state this is very puzzling.

At the University of Iowa Hospitals and Clinics our engineers were able to quickly (within a few days) devise a solution by creating a 6” x 6” hole (see photos) through the operating room wall on the semi-restricted side of the room. The area identified for creation of this portal was determined by hose access to the OR table with minimal interference with staff and equipment; access to power; and the ability to leave proper corridor width per life safety code. Testing demonstrated that positive pressure was able to be maintained in the OR after creation of the portal. The portal itself with a sliding door was constructed of Corian in some cases and stainless steel in others. A hose protection mat was placed in the ORs to protect the HCU hoses and to provide a ramp effect for equipment to be relocated as needed during the cases. One advantage of the T3 HCU is that remotes can be purchased that allow the perfusionist in the OR to control the HCU located outside of the room. Once the HCUs were moved out of the OR, we demonstrated no difficulty with appropriate heating or cooling. Remember, given the long incubation and detection period of these infections (maximum 6 years to date), if you do not eliminate the risk now, you will likely be chasing cases for many years with no end in sight.


Sunday, March 26, 2017

Mycobacterium chimaera: How big is the iceberg? And about that iceberg...


The reports of invasive M. chimaera infections linked to heater-cooler devices keep rolling in, but still nobody has any idea how big this problem is. Mike and I each get sporadic e-mails or calls from places where new cases have popped up, and I’m convinced we are still dealing with the proverbial “tip of the iceberg.” The knowledge that invasive M. chimaera disease should be in the differential for certain symptoms after cardiac surgery is still spotty, and confined to those who practice ID or cardiothoracic surgery. Most patients who develop vague symptoms like weight loss and fatigue (even those who got a valve replaced a year ago) are likely to go to their primary care physician first. Only those affected who encounter someone familiar with this global outbreak are likely to get the right diagnostic evaluation (to include AFB cultures). Hence this pattern: a case is detected in a given location, after which there is a lot of attention focused on the problem, including media reports and provider notifications, and then several more cases are discovered.

My current unofficial (and extremely incomplete) global case count is at least 108, which includes cases reported in the news or in published reports from public health agencies, meetings, or journals. This count includes cases from US (New York, Ohio, Pennsylvania, Michigan, Minnesota, Iowa, Tennessee, Florida, and California), England, Ireland, Switzerland, Germany, Netherlands, France, Spain, Hong Kong, and Australia.

I’m sure there are many more we’ve not heard about, so feel free to email or comment below if you know of others. The bottom line is that we are long overdue for (1) mandatory public reporting of invasive non-tuberculous mycobacterial disease, and (2) a global registry to track this outbreak, and to help inform diagnosis, treatment and prevention approaches.

Now about that iceberg…I’ll bet the iceberg above is the most common single image used in presentations about infection prevention and antibiotic resistance (possibly several other fields, too). It’s a great graphic for depicting the idea that a problem is much bigger than it may appear on superficial or initial assessment (for example, that clinical cultures miss the vast majority of carriers of resistant organisms, or that active TB cases are vastly outnumbered by latent TB cases). I think I’ve used that graphic in at least 2 dozen talks, maybe more. When I saw it again last week, I started to wonder from whence it came. To my mild disappointment, I found that it isn’t a real photo (it’s too good to be a real photo!), but is actually a composite of four different photos. For more information, see here—the credit for the digital composite goes to Ralph A. Clevenger, according to this account.

Anyway, as a profession I think we should move on to a different iceberg photograph. I nominate the one below, by Joshua Holko, based upon the facts that (1) it is an actual photo (I hope!), (2) it still shows how large the portion of the iceberg below the water is, and (most importantly), (3) it has penguins!



Thursday, October 13, 2016

An outbreak in slow motion

Not too many infections have crude mortality rates of 50% or more. Those that do generally inspire fear, alarm, and media coverage (see: avian influenza, Ebola). Hence my surprise that the heater-cooler device (HCD)-associated M. chimaera global outbreak has attracted so little attention in clinical, public health and media circles.

Now, over a year since Hugo Sax and his group first described the role of HCDs in invasive M. chimaera infections, this may be about to change. Why? Because today the CDC published (in MMWR) the results of whole genome sequencing from 11 patients and 5 HCDs in Iowa and two centers in Pennsylvania (the Iowa isolates were from our patients and devices). The results confirm what we’ve suspected from the beginning: this is a point source outbreak, and the likely source is the factory in Germany where the HCDs are manufactured. There are now several media outlets that have picked up the story (here's one from NY Times and one from Consumer Reports). 

In response to these findings, both CDC and FDA are making new recommendations for centers that use the implicated HCD (the LivaNova (formerly Sorin) 3T). You can read the details for yourself, but the major new recommendations are for provider and patient notification (not just for centers that have detected cases, but for all that use the devices), and from the FDA, a recommendation to remove any HCDs linked to contamination or clinical cases, and to transition away from use of the 3T model entirely (the alert states that use of 3T units manufactured prior to September 2014 “should be limited to emergent and/or life-threatening situations if no other heater cooler devices are available”). 

The problem is that the 3T has at least 60% of the HCD market, and if all hospitals stopped using them (even just those manufactured prior to September 2014), there wouldn’t be enough other units to fill the void. Also important to note: the FDA alert provides evidence that some 3T’s manufactured after September 2014 have been found to be contaminated with M chimaera. Whether the post-2014 contamination represents point-source contamination or not, it’s a huge problem and calls into question the use of the manufacture date in decision-making.

The bottom line is that the 3T is a proven bio-aerosol generator, and should not be in the same room as the operative field. No amount of focus on cleaning and disinfection, the direction of the exhaust fan, or the results of water cultures (which, as we’ve pointed out, are not actionable) changes that.

Sunday, January 22, 2017

M. chimaera update: SHEA webinar


Tomorrow (Monday, January 23 at 1 pm Eastern Time), Mike and I will be presenting an update on the global outbreak of heater-cooler device associated Mycobacterium chimaera. You can sign up for this SHEA webinar here (sorry for the late notice!). A CDC representative will join us for the Q&A.  Once it is done we'll either post a link to the webinar or make the slides available on the blog.

We hope you can join us!

UPDATE: here is the link to listen to the webinar

Wednesday, February 17, 2016

M. chimaera update

Big Sky, Montana
Dan and I are at the Infectious Diseases Winter Course in Big Sky, Montana. I'm writing this blog post sitting by the fire while he's out hitting the slopes. This morning, Dan gave a talk on the M. chimaera outbreak associated with heater cooler units in an effort to raise awareness among ID clinicians.

While we continue to work on case finding at the University of Iowa, we continue to receive calls from physicians across the country asking for advice. One of the major problems is the paucity of data to guide recommendations for the best approach to outbreak investigation.

We need CDC and FDA to expedite the needed work to answer many questions. At this point, there is no published descriptive epidemiology of the cases in the United States. There's still no information on molecular typing of the patient and environmental isolates to sort out whether this a point source outbreak with contamination occurring during the manufacturing process of the heater cooler devices. Every hospital working on this issue is struggling alone in the dark, while it's becoming increasingly clear that this is an expanding outbreak.

Today we learned that a class action lawsuit has been filed against Sorin, the manufacturer of the implicated devices.

We'll post more on this topic as it unfolds.

Tuesday, October 11, 2016

CDC Webinar on the M. chimaera outbreak

The CDC has just posted a webinar from late August on the M. chimaera outbreak, if you are interested in an overview.  It may be worth your while to look at this (or read our prior posts) this week, in anticipation of some additional information that will be coming soon (more details later this week).

The video below starts with introductions to the problem by Mike Bell and Joe Perz at CDC, than at 18:00 you can hear Chuck Daley from National Jewish discuss the clinical aspects of the outbreak, at 30:00 I discuss the local outbreak response, and at 46:00 Keith Allen provides a surgeon's perspective.


Saturday, March 30, 2019

HAI Controversies at 10 years

It’s been a decade since we started this infection prevention blog. So I was planning to write a reflective post on whether it was still relevant, why I'm blogging less frequently, perhaps expand upon Eli’s post about why he stopped blogging, and maybe even add my voice to all those proclaiming that “blogs are dead”. 

So I went to our blogger stats page to get some data, and found a few interesting tidbits: this blog has had over 3 million page views since its inception, and is still getting over 10,000 page views monthly! Is this accurate? I have no idea, but it persuades me to hold off, at least for a while, on predicting the demise of the blog. 

A few other fun observations from the stats page: see the huge spike of page views in late 2013? That resulted from an almost 2-year old post being picked up in a Reddit thread (a post by Mike about neckties). The next four most-viewed posts in the blog’s history are about toilet lids for infection prevention, contact lenses, sinks and Fusarium, the inability to eradicate M. chimaera from heater-cooler devices, and the epic Skullcap Feud still raging between surgeons and AORN. With topics like these, who needs cat videos?

We started the blog to have a forum for freewheeling, even hyperbolic, discussions of controversial infection prevention topics. I think much of that back-and-forth has moved to Twitter. I’ve now come to believe that the blog is at its best during the early stages of outbreaks/crises that impact hospital infection prevention programs—to provide updates, opinions, suggestions for colleagues struggling with the same issues. The best recent example is the global M. chimaera outbreak, posting our thoughts as we navigated our own hospital response. For these complex situations--especially in the early, evidence-free phase--a blog post may allow for more nuanced discussions of the pros or cons of different approaches. Though I've been pretty impressed with some of the amazing twitter threads I find on med Twitter, a great example being this discussion of the Merino Trial.

I guess we should definitely have a larger discussion about the relevance of medical blogging.  Maybe on Twitter....

Monday, May 23, 2016

Finally, the outbreak of meetings!

We’ve done a lot of blogging about the insidious M. chimaera outbreak linked to heater-cooler units (HCUs). Still, the general awareness of this problem lags, despite the fact that an untold number of HCUs are affected, and an unknown number of people are suffering with an undiagnosed granulomatous inflammatory process that has a crude mortality rate in excess of 50%. We heard excellent talks about the issue at SHEA 2016 from Emily Cooper at Wellspan (10 cases, 6 deaths), from Dr. Ray Chinn in the “Challenging Cases in Infection Prevention” session, and I gave a late-breaker on Friday evening (slides to follow in an upcoming post). By the way, SHEA 2016 was EXCELLENT, and the slide image above is from Bob Weinstein’s talk in the SHEA/CDC Training Course. 

Well, the FDA is hosting a meeting on this problem, details of which can be found here. I will be presenting about our experience at Iowa, but others with more expertise will be there as well, from US and Europe. I’m hoping to come away with a better sense of the way forward, which in my view must address (1) better case finding: improved clinician awareness via national patient and provider notifications, so that clinicians everywhere recognize exposure to cardiopulmonary bypass as a risk factor for disseminated MAC infection among patients with implants (valves, grafts), and creative approaches to identify potential cases who currently carry other diagnoses (e.g. sarcoidosis); (2) improved management of existing cases: we desperately need more clinical information about management approaches and outcomes, to help guide decision making for patients and their physicians; and (3) prevention of additional cases: the HCU has been revealed to be a bioaerosol generator that is too risky to share air with an open chest—the make/model implicated in this particular outbreak must obviously be removed from ORs, and other devices that include fans and water sources should also be scrutinized for the risk they may pose.

Sunday, October 23, 2016

Outcome bias

I grew up in Wheaton, Illinois, one of Chicago’s western suburbs, and became a Cubs fan by default. All my friends were Cubs fans, my dad took us to Wrigley for games (never Comiskey!), and the Cubs games were televised on channel 9 while the White Sox were usually on a UHF channel (44) that was hard to tune in (if you remember wiggling a dial to get your grainy local UHF signals, you are old like me). The photo above is from a game I attended in 1969 with my family. That year, and every year since 1945, ended the same way: with the Cubs failing to win the NL pennant. 

So last night’s victory is a gigantic step forward for the Cubs, who will now play Cleveland in the World Series. By now you’re asking, “yes, but that’s a game and this blog is about infection prevention, what’s the connection”?

See Cub manager Joe Maddon’s quote in this piece, about how he approaches challenges:
“When you get to this particular moment, to try to avoid being outcome-biased, just . . . continue to work on the process, which is inning by inning — score first, win the inning. Those are the kind of thoughts that get you beyond this moment.”
I think you can interpret this quote in two ways, each of which applies to infection prevention. 

First, he may have meant to say “avoid being outcome-focused”. In other words, stop wasting energy worrying about your outcomes, instead put your energy into the processes that you know will, eventually, move the outcome in a favorable direction. This is becoming increasingly difficult in infection prevention as CMS PFP programs put more and more pressure on rates. The temptation is to put time and energy into activities that might impact the outcome quickly but without doing anything to improve the safety of patients (gaming the definitions, empiric treatment approaches, changing lab practice). Counterproductive, and in many cases also bad for patients.

Alternatively, he could have been literally referring to “outcome bias”, which is an error in evaluating the quality of a decision, or the effectiveness of a practice, when the outcome is already known. This might lead one to deviate from an effective practice because a bad outcome occurred in the past when the practice was in place, or to institute a dubious practice because prior implementation was coincident with a favorable outcome. This ignores the fact that outcomes are often influenced by a myriad of factors, many of which are not understood or not under the decision-maker’s control.

The infection prevention take-home from either interpretation? Focus on those practices that have been demonstrated to improve outcomes--keep your eye on the process and the outcomes will follow. Avoid gimmicks that might move the outcome needle but for which no evidence exists that patients will benefit.

P.S. I hope to see you at IDWeek in New Orleans!  I'll be joining Debbie Goff on Saturday morning to talk about social media, and Thursday will be facing off with Cliff McDonald about the C. difficile screening issue!  We will also be presenting four-center data on the ongoing M. chimaera outbreak on Saturday afternoon. If I am mysteriously absent from any of the above, it's because I'm on a plane headed to Cleveland or Chicago, to try to sneak in to a World Series game!

OSHA! OSHA! OSHA!

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